Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 RN7SL837P-201ENST00000463010 287 ntBASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 AC036164.1-201ENST00000570544 333 ntBASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CLIP2Q9UDT6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 LINC02447-202ENST00000501888 2146 ntBASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIP2Q9UDT6 AC112504.1-201ENST00000623415 1841 ntBASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 PPT1-215ENST00000641471 2368 ntBASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 FAM86LP-201ENST00000478302 853 ntBASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 MIR4313-201ENST00000580760 101 ntBASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIP2Q9UDT6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLIP2Q9UDT6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms