Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AC093433.1-201ENST00000458048 571 ntBASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AC093813.1-201ENST00000605066 256 ntBASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AC018665.1-201ENST00000622927 1362 ntBASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 AC073347.1-201ENST00000421633 2643 ntBASIC18.87■□□□□ 0.61
HMG20BQ9P0W2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 MIR1909-201ENST00000411312 80 ntBASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 AC022210.1-201ENST00000449856 793 ntBASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 AC119751.2-201ENST00000504529 210 ntBASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 AP001889.1-201ENST00000525414 633 ntBASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 AC068587.3-201ENST00000526613 355 ntBASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 SNX29P1-201ENST00000548357 1007 ntBASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 AL359881.2-201ENST00000602973 570 ntBASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMG20BQ9P0W2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AC013268.4-201ENST00000637413 2228 ntBASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.85■□□□□ 0.61
HMG20BQ9P0W2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms