Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC061975.2-201ENST00000581722 295 ntBASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 SPTSSB-204ENST00000617024 1292 ntBASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 BNIP3P1-202ENST00000550043 1585 ntBASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 AL009178.2-201ENST00000597278 2719 ntBASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 AC148477.4-201ENST00000613430 1793 ntBASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
LIN7CQ9NUP9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 HLA-H-201ENST00000383620 1096 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AGAP7P-201ENST00000582299 2062 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AGAP14-201ENST00000624701 2060 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AC009090.5-201ENST00000624886 2285 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AC091951.1-201ENST00000512854 2465 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AC018892.3-201ENST00000623986 2499 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 CICP24-201ENST00000605464 2705 ntBASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LIN7CQ9NUP9 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AC013726.1-201ENST00000563747 2285 ntBASIC13□□□□□ -0.33
LIN7CQ9NUP9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13□□□□□ -0.33
LIN7CQ9NUP9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13□□□□□ -0.33
LIN7CQ9NUP9 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms