Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.24■□□□□ 0.35
BLOC1S4Q9NUP1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 MIR4745-201ENST00000577608 62 ntBASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 AC107373.2-201ENST00000607735 490 ntBASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 AC007541.1-201ENST00000570282 1469 ntBASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BLOC1S4Q9NUP1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 WASH3P-207ENST00000560956 1394 ntBASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BLOC1S4Q9NUP1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BLOC1S4Q9NUP1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms