Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SDHAF3Q9NRP4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 PAUPAR-201ENST00000630360 2965 ntBASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 AC087499.6-201ENST00000411576 835 ntBASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 RARRES2P5-201ENST00000564013 466 ntBASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 RRP7BP-205ENST00000566851 833 ntBASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SDHAF3Q9NRP4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SDHAF3Q9NRP4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SDHAF3Q9NRP4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SDHAF3Q9NRP4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.33□□□□□ -0.11
SDHAF3Q9NRP4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.33□□□□□ -0.11
SDHAF3Q9NRP4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SDHAF3Q9NRP4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.33□□□□□ -0.11
SDHAF3Q9NRP4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 SERBP1P5-201ENST00000510079 1181 ntBASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 AC036164.1-201ENST00000570544 333 ntBASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 RN7SL204P-201ENST00000582831 262 ntBASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 AC127383.1-201ENST00000444697 1800 ntBASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SDHAF3Q9NRP4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SDHAF3Q9NRP4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SDHAF3Q9NRP4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDHAF3Q9NRP4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SDHAF3Q9NRP4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms