Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 AC117489.1-201ENST00000625169 3217 ntBASIC16.46■□□□□ 0.23
CD248Q9HCU0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CD248Q9HCU0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CD248Q9HCU0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CD248Q9HCU0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CD248Q9HCU0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD248Q9HCU0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AL353779.1-201ENST00000434793 351 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 GNAQP1-201ENST00000444815 1067 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 HLA-J-202ENST00000469281 1241 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AP002490.2-201ENST00000524791 560 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 AC135586.1-201ENST00000539323 574 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AC020765.3-201ENST00000613051 740 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 AC007541.1-201ENST00000570282 1469 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 CU639417.3-201ENST00000624240 1404 ntBASIC16.45■□□□□ 0.22
CD248Q9HCU0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CD248Q9HCU0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD248Q9HCU0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 CICP20-201ENST00000443330 2801 ntBASIC16.44■□□□□ 0.22
CD248Q9HCU0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD248Q9HCU0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD248Q9HCU0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms