Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 AC105917.1-201ENST00000506637 2539 ntBASIC18.08■□□□□ 0.48
SH2D4AQ9H788 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 REXO1L6P-201ENST00000603433 1515 ntBASIC18.08■□□□□ 0.48
SH2D4AQ9H788 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SH2D4AQ9H788 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 AC244669.2-201ENST00000612320 853 ntBASIC18.07■□□□□ 0.48
SH2D4AQ9H788 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SH2D4AQ9H788 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 AC024909.3-201ENST00000611513 2257 ntBASIC18.06■□□□□ 0.48
SH2D4AQ9H788 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SH2D4AQ9H788 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SH2D4AQ9H788 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms