Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
NKX6-2Q9C056 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 AL590787.1-201ENST00000568856 1315 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TP73-AS1-210ENST00000637775 1455 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 AL031595.1-201ENST00000623969 4709 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 AC148477.5-201ENST00000625164 1645 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PEG13-201ENST00000631594 5667 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TSPY15P-201ENST00000457163 923 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 HYMAI.1-201ENST00000620949 238 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 AP001350.2-201ENST00000625104 1094 ntBASIC12.67□□□□□ -0.38
NKX6-2Q9C056 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NKX6-2Q9C056 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms