Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 AC023908.3-201ENST00000564211 3047 ntBASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 LINC00528-201ENST00000600723 2160 ntBASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 AL136982.4-201ENST00000437689 1740 ntBASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 UGT1A2P-201ENST00000454886 866 ntBASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 AC097359.3-201ENST00000603982 1210 ntBASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 AC008267.7-201ENST00000624570 1194 ntBASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXP3Q9BZS1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 SPDYE7P-202ENST00000420373 878 ntBASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TSPY16P-201ENST00000449843 468 ntBASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 AC140878.1-201ENST00000565277 250 ntBASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 AC027307.2-201ENST00000591252 911 ntBASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 AC007191.1-201ENST00000623179 2995 ntBASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 CYP4F24P-201ENST00000586049 1580 ntBASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FOXP3Q9BZS1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms