Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM55Q9BYV6 FGD5P1-202ENST00000614866 2498 ntBASIC15.83■□□□□ 0.12
TRIM55Q9BYV6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM55Q9BYV6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.83■□□□□ 0.12
TRIM55Q9BYV6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM55Q9BYV6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 AL671277.1-201ENST00000429656 993 ntBASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 COX20P2-201ENST00000452636 358 ntBASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 AL390955.2-201ENST00000603032 514 ntBASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 AC009093.7-201ENST00000623853 1223 ntBASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM55Q9BYV6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 CICP4-201ENST00000447359 2812 ntBASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 Z92544.3-201ENST00000624747 417 ntBASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
TRIM55Q9BYV6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms