Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 EMBP1-201ENST00000458200 901 ntBASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AC018845.2-201ENST00000568326 409 ntBASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AC138969.3-201ENST00000546612 1459 ntBASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AC138932.2-201ENST00000548268 1459 ntBASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AC126755.4-201ENST00000549796 1459 ntBASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AC012508.2-201ENST00000567613 1472 ntBASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 AL137784.3-201ENST00000623858 2288 ntBASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 AL359881.3-201ENST00000602640 1721 ntBASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 MBLAC2-202ENST00000514906 1936 ntBASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 AL031284.1-201ENST00000419297 478 ntBASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 REXO1L4P-201ENST00000605109 1937 ntBASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
GABARAPL3Q9BY60 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms