Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 AC012645.4-201ENST00000610691 1061 ntBASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF4Q9BUZ4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 CETN4P-206ENST00000642099 2168 ntBASIC14□□□□□ -0.17
TRAF4Q9BUZ4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 GOLGA2P9-201ENST00000596977 1937 ntBASIC14□□□□□ -0.17
TRAF4Q9BUZ4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 MTND6P24-201ENST00000440466 518 ntBASIC14□□□□□ -0.17
TRAF4Q9BUZ4 CRB3P1-201ENST00000449338 276 ntBASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 MAX-210ENST00000555419 765 ntTSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 AL035252.4-201ENST00000624174 288 ntBASIC14□□□□□ -0.17
TRAF4Q9BUZ4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAF4Q9BUZ4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF4Q9BUZ4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms