Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC138035.3-201ENST00000622706 2791 ntBASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC104581.4-201ENST00000623126 3052 ntBASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 SPDYE17-201ENST00000412399 783 ntBASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 AP001282.1-201ENST00000531301 1499 ntBASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PCGF1Q9BSM1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.15□□□□□ -0.31
PCGF1Q9BSM1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.15□□□□□ -0.31
PCGF1Q9BSM1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PCGF1Q9BSM1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
PCGF1Q9BSM1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 CICP4-201ENST00000447359 2812 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 AC112504.1-201ENST00000623415 1841 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 PIN1P1-201ENST00000412108 996 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PCGF1Q9BSM1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms