Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 MIR4321-201ENST00000592276 80 ntBASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 AC021097.1-201ENST00000607902 574 ntBASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC22CQ9BRL7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 AC129492.6-201ENST00000611383 1305 ntBASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 MST1P2-201ENST00000457982 2291 ntBASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 TERF1P1-201ENST00000311003 1181 ntBASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 AL671277.2-201ENST00000458060 996 ntBASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 AP002469.2-201ENST00000531724 424 ntBASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 AC018529.2-202ENST00000611482 3087 ntBASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC22CQ9BRL7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SEC22CQ9BRL7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms