Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.85□□□□□ -0.19
VRK1Q99986 AC004890.2-204ENST00000481968 304 ntBASIC13.85□□□□□ -0.19
VRK1Q99986 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.85□□□□□ -0.19
VRK1Q99986 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.85□□□□□ -0.19
VRK1Q99986 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 AC190387.1-201ENST00000551683 408 ntBASIC13.85□□□□□ -0.19
VRK1Q99986 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.85□□□□□ -0.19
VRK1Q99986 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.85□□□□□ -0.19
VRK1Q99986 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 AC026979.3-201ENST00000607315 403 ntBASIC13.85□□□□□ -0.19
VRK1Q99986 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
VRK1Q99986 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VRK1Q99986 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VRK1Q99986 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.85□□□□□ -0.19
VRK1Q99986 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK1Q99986 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 AC022144.1-201ENST00000602255 1580 ntBASIC13.84□□□□□ -0.19
VRK1Q99986 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VRK1Q99986 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK1Q99986 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VRK1Q99986 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.84□□□□□ -0.19
VRK1Q99986 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VRK1Q99986 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.84□□□□□ -0.19
VRK1Q99986 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.84□□□□□ -0.19
VRK1Q99986 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.84□□□□□ -0.19
VRK1Q99986 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.84□□□□□ -0.19
VRK1Q99986 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.84□□□□□ -0.19
VRK1Q99986 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK1Q99986 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK1Q99986 LINC01144-201ENST00000626198 1710 ntBASIC13.84□□□□□ -0.19
VRK1Q99986 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms