Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LITAFQ99732 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LITAFQ99732 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LITAFQ99732 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 FAM185BP-201ENST00000443595 716 ntBASIC10.36□□□□□ -0.75
LITAFQ99732 KRT18P57-201ENST00000443599 1254 ntBASIC10.36□□□□□ -0.75
LITAFQ99732 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 AC022616.7-201ENST00000525383 220 ntBASIC10.36□□□□□ -0.75
LITAFQ99732 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.36□□□□□ -0.75
LITAFQ99732 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 AC099336.1-202ENST00000602961 463 ntBASIC10.36□□□□□ -0.75
LITAFQ99732 AC097359.3-201ENST00000603982 1210 ntBASIC10.36□□□□□ -0.75
LITAFQ99732 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.36□□□□□ -0.75
LITAFQ99732 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.36□□□□□ -0.75
LITAFQ99732 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 AC083964.2-201ENST00000623988 2396 ntBASIC10.36□□□□□ -0.75
LITAFQ99732 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LITAFQ99732 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 Z82170.1-201ENST00000625081 3192 ntBASIC10.35□□□□□ -0.75
LITAFQ99732 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC10.35□□□□□ -0.75
LITAFQ99732 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LITAFQ99732 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.35□□□□□ -0.75
LITAFQ99732 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LITAFQ99732 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC10.35□□□□□ -0.75
LITAFQ99732 PHKG1P2-201ENST00000457537 863 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms