Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 AL845331.1-201ENST00000424978 1190 ntBASIC14.72□□□□□ -0.05
NR1H4Q96RI1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 VENTXP7-201ENST00000475503 772 ntBASIC14.72□□□□□ -0.05
NR1H4Q96RI1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 REXO1L3P-201ENST00000622202 1288 ntBASIC14.72□□□□□ -0.05
NR1H4Q96RI1 AP001350.2-201ENST00000625104 1094 ntBASIC14.72□□□□□ -0.05
NR1H4Q96RI1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H4Q96RI1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 PMS2P1-201ENST00000431037 1228 ntBASIC14.71□□□□□ -0.05
NR1H4Q96RI1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 AL049597.2-201ENST00000565575 961 ntBASIC14.71□□□□□ -0.05
NR1H4Q96RI1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 AL121672.3-201ENST00000608644 468 ntBASIC14.71□□□□□ -0.05
NR1H4Q96RI1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 PMPCAP1-201ENST00000508114 1576 ntBASIC14.71□□□□□ -0.05
NR1H4Q96RI1 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H4Q96RI1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
NR1H4Q96RI1 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.7□□□□□ -0.06
NR1H4Q96RI1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.7□□□□□ -0.06
NR1H4Q96RI1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 AL031133.1-201ENST00000406807 723 ntBASIC14.7□□□□□ -0.06
NR1H4Q96RI1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.7□□□□□ -0.06
NR1H4Q96RI1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 AC091607.1-201ENST00000490318 1060 ntBASIC14.7□□□□□ -0.06
NR1H4Q96RI1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
NR1H4Q96RI1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.7□□□□□ -0.06
NR1H4Q96RI1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms