Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC123567.1-201ENST00000548294 1261 ntBASIC14.15□□□□□ -0.14
LRRC46Q96FV0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC106886.1-201ENST00000568660 600 ntBASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC004461.2-201ENST00000629517 803 ntBASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AL109936.8-201ENST00000641772 604 ntBASIC14.15□□□□□ -0.14
LRRC46Q96FV0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 AC005622.1-201ENST00000636801 1703 ntBASIC14.15□□□□□ -0.14
LRRC46Q96FV0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC46Q96FV0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.15□□□□□ -0.15
LRRC46Q96FV0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRRC46Q96FV0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRRC46Q96FV0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRRC46Q96FV0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 AC006058.4-201ENST00000624016 1670 ntBASIC14.14□□□□□ -0.15
LRRC46Q96FV0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 ARSEP1-201ENST00000420443 635 ntBASIC14.14□□□□□ -0.15
LRRC46Q96FV0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 POU5F1P6-201ENST00000466990 990 ntBASIC14.14□□□□□ -0.15
LRRC46Q96FV0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 RAB43P1-201ENST00000561790 589 ntBASIC14.14□□□□□ -0.15
LRRC46Q96FV0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 MIR6805-201ENST00000615055 62 ntBASIC14.14□□□□□ -0.15
LRRC46Q96FV0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC46Q96FV0 CICP14-201ENST00000629111 2732 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms