Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC011467.4-201ENST00000594891 528 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 AL138828.2-201ENST00000615812 383 ntBASIC16.49■□□□□ 0.23
TRIM11Q96F44 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM11Q96F44 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM11Q96F44 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 OR2I1P-209ENST00000641730 5365 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AL512361.1-201ENST00000554200 418 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AC010336.2-201ENST00000564226 506 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 AC004449.1-201ENST00000564240 433 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 AC051619.7-201ENST00000568314 623 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AL645728.2-202ENST00000641679 227 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 MYO15B-237ENST00000642007 4893 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM11Q96F44 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.48■□□□□ 0.23
TRIM11Q96F44 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM11Q96F44 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM11Q96F44 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 AC023824.1-201ENST00000562945 2975 ntBASIC16.47■□□□□ 0.23
TRIM11Q96F44 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.47■□□□□ 0.23
TRIM11Q96F44 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM11Q96F44 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM11Q96F44 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM11Q96F44 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM11Q96F44 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM11Q96F44 AL139400.1-201ENST00000366220 510 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms