Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KRT18P2-201ENST00000447938 1258 ntBASIC13.88□□□□□ -0.19
RFT1Q96AA3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.88□□□□□ -0.19
RFT1Q96AA3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 KRT19P2-202ENST00000557173 1012 ntBASIC13.88□□□□□ -0.19
RFT1Q96AA3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 AC006504.5-208ENST00000588784 2401 ntBASIC13.88□□□□□ -0.19
RFT1Q96AA3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AL589702.1-201ENST00000641229 1509 ntBASIC13.87□□□□□ -0.19
RFT1Q96AA3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 PRYP6-201ENST00000514804 343 ntBASIC13.87□□□□□ -0.19
RFT1Q96AA3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AC034105.1-201ENST00000563488 319 ntBASIC13.87□□□□□ -0.19
RFT1Q96AA3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AC134407.2-201ENST00000625089 1978 ntBASIC13.87□□□□□ -0.19
RFT1Q96AA3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 PMS2P7-201ENST00000506558 1336 ntBASIC13.87□□□□□ -0.19
RFT1Q96AA3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.87□□□□□ -0.19
RFT1Q96AA3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RFT1Q96AA3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms