Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 TMEM261P1-201ENST00000604899 340 ntBASIC16.47■□□□□ 0.23
ATP2A3Q93084 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 AC017083.2-201ENST00000608069 979 ntBASIC16.47■□□□□ 0.23
ATP2A3Q93084 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 CDC14C-201ENST00000428251 1719 ntBASIC16.47■□□□□ 0.23
ATP2A3Q93084 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A3Q93084 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATP2A3Q93084 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 AC098850.1-201ENST00000419919 790 ntBASIC16.46■□□□□ 0.23
ATP2A3Q93084 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A3Q93084 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A3Q93084 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP2A3Q93084 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP2A3Q93084 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.46■□□□□ 0.22
ATP2A3Q93084 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 AC126177.1-201ENST00000547829 2218 ntBASIC16.45■□□□□ 0.22
ATP2A3Q93084 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 KRT17P8-201ENST00000540749 863 ntBASIC16.45■□□□□ 0.22
ATP2A3Q93084 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP2A3Q93084 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
ATP2A3Q93084 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms