Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.55■□□□□ 0.24
DDX1Q92499 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DDX1Q92499 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.55■□□□□ 0.24
DDX1Q92499 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
DDX1Q92499 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
DDX1Q92499 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.54■□□□□ 0.24
DDX1Q92499 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
DDX1Q92499 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
DDX1Q92499 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.54■□□□□ 0.24
DDX1Q92499 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.54■□□□□ 0.24
DDX1Q92499 ACA64.2-201ENST00000459014 129 ntBASIC16.54■□□□□ 0.24
DDX1Q92499 AC092658.1-201ENST00000505836 891 ntBASIC16.54■□□□□ 0.24
DDX1Q92499 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.54■□□□□ 0.24
DDX1Q92499 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.54■□□□□ 0.24
DDX1Q92499 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.54■□□□□ 0.24
DDX1Q92499 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.54■□□□□ 0.24
DDX1Q92499 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.54■□□□□ 0.24
DDX1Q92499 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.54■□□□□ 0.24
DDX1Q92499 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
DDX1Q92499 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.54■□□□□ 0.24
DDX1Q92499 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
DDX1Q92499 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DDX1Q92499 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
DDX1Q92499 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.54■□□□□ 0.24
DDX1Q92499 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.53■□□□□ 0.24
DDX1Q92499 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 ZBED1P1-201ENST00000502364 1930 ntBASIC16.53■□□□□ 0.24
DDX1Q92499 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
DDX1Q92499 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
DDX1Q92499 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
DDX1Q92499 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
DDX1Q92499 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.53■□□□□ 0.24
DDX1Q92499 AC104457.1-201ENST00000401024 814 ntBASIC16.53■□□□□ 0.24
DDX1Q92499 AP006294.1-201ENST00000415407 339 ntBASIC16.53■□□□□ 0.24
DDX1Q92499 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.53■□□□□ 0.24
DDX1Q92499 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.53■□□□□ 0.24
DDX1Q92499 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.53■□□□□ 0.24
DDX1Q92499 AL645728.2-202ENST00000641679 227 ntBASIC16.53■□□□□ 0.24
DDX1Q92499 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.53■□□□□ 0.24
DDX1Q92499 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.53■□□□□ 0.24
DDX1Q92499 CICP24-201ENST00000605464 2705 ntBASIC16.53■□□□□ 0.24
DDX1Q92499 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DDX1Q92499 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DDX1Q92499 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DDX1Q92499 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
DDX1Q92499 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DDX1Q92499 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.52■□□□□ 0.24
DDX1Q92499 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
DDX1Q92499 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DDX1Q92499 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
DDX1Q92499 AL133338.1-201ENST00000565695 1517 ntBASIC16.52■□□□□ 0.24
DDX1Q92499 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
DDX1Q92499 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.52■□□□□ 0.24
DDX1Q92499 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DDX1Q92499 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.52■□□□□ 0.24
DDX1Q92499 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.52■□□□□ 0.24
DDX1Q92499 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.52■□□□□ 0.24
DDX1Q92499 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
DDX1Q92499 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.52■□□□□ 0.24
DDX1Q92499 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.52■□□□□ 0.24
DDX1Q92499 AL158212.4-201ENST00000624062 1286 ntBASIC16.52■□□□□ 0.24
DDX1Q92499 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
DDX1Q92499 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms