Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 PCDH8P1-201ENST00000428983 2773 ntBASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 AL391280.1-201ENST00000506969 1062 ntBASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 AC127383.1-201ENST00000444697 1800 ntBASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 KRT8P4-201ENST00000509735 1454 ntBASIC20.18■□□□□ 0.82
RAPGEF4Q8WZA2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAPGEF4Q8WZA2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 EIF4HP1-201ENST00000453115 687 ntBASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 RN7SL190P-201ENST00000582519 257 ntBASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 AL603764.1-201ENST00000636452 321 ntBASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAPGEF4Q8WZA2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAPGEF4Q8WZA2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms