Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RFWD2Q8NHY2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 AC010327.5-201ENST00000586923 3061 ntBASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 MTHFR-210ENST00000641407 2387 ntBASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 AC108751.1-201ENST00000490852 363 ntBASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 PRYP6-201ENST00000514804 343 ntBASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD2Q8NHY2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.46■□□□□ 0.06
RFWD2Q8NHY2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
RFWD2Q8NHY2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFWD2Q8NHY2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.46■□□□□ 0.06
RFWD2Q8NHY2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFWD2Q8NHY2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFWD2Q8NHY2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
RFWD2Q8NHY2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 HLA-A-201ENST00000376802 1334 ntBASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RFWD2Q8NHY2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms