Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIMC1Q8NDZ2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AC241585.1-201ENST00000433527 519 ntBASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 RN7SL618P-201ENST00000477850 296 ntBASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AL096865.1-201ENST00000606796 927 ntBASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 AC068587.6-202ENST00000641839 5619 ntBASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SIMC1Q8NDZ2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 MRPS18AP1-201ENST00000414458 589 ntBASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 AC009477.1-201ENST00000452936 217 ntBASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 AC004890.2-204ENST00000481968 304 ntBASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 SPDYE18-201ENST00000510091 1050 ntBASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 Z97205.2-201ENST00000564697 1639 ntBASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SIMC1Q8NDZ2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms