Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AL353779.1-201ENST00000434793 351 ntBASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 SPTLC1P1-201ENST00000447199 261 ntBASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AL158212.4-201ENST00000624062 1286 ntBASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB42Q8N4Z0 AC105250.1-201ENST00000509378 2057 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 PAUPAR-201ENST00000630360 2965 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 RN7SL204P-201ENST00000582831 262 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 AL132655.2-201ENST00000596276 594 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 AC099568.2-201ENST00000609194 695 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 SBF1P1-201ENST00000444527 5631 ntBASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB42Q8N4Z0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 TMBIM7P-203ENST00000641617 1718 ntBASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 SLC7A15P-201ENST00000424028 1363 ntBASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AC023310.3-201ENST00000557027 670 ntBASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AC100756.1-201ENST00000562736 682 ntBASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AC138749.3-201ENST00000567691 622 ntBASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AC027307.3-201ENST00000594262 1100 ntBASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 AC116165.1-201ENST00000611806 668 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms