Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AC026954.1-201ENST00000429771 1293 ntBASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AC016694.1-201ENST00000434179 700 ntBASIC17.31■□□□□ 0.36
TRIM50Q86XT4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 MIR4538-201ENST00000581377 78 ntBASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM50Q86XT4 MST1L-201ENST00000442552 2185 ntBASIC17.3■□□□□ 0.36
TRIM50Q86XT4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 CICP13-201ENST00000422015 2789 ntBASIC17.3■□□□□ 0.36
TRIM50Q86XT4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AC009090.5-201ENST00000624886 2285 ntBASIC17.3■□□□□ 0.36
TRIM50Q86XT4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 FO681548.1-201ENST00000455617 1132 ntBASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AC022494.1-201ENST00000466044 728 ntBASIC17.3■□□□□ 0.36
TRIM50Q86XT4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AC012183.1-201ENST00000625197 499 ntBASIC17.3■□□□□ 0.36
TRIM50Q86XT4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM50Q86XT4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.29■□□□□ 0.36
TRIM50Q86XT4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ACKR1-201ENST00000368121 1240 ntBASIC17.29■□□□□ 0.36
TRIM50Q86XT4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms