Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHMP1BQ7LBR1 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 AC245100.5-201ENST00000452108 331 ntBASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 RN7SL618P-201ENST00000477850 296 ntBASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 AC243562.2-201ENST00000561247 970 ntBASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 FAM45BP-202ENST00000592932 1624 ntBASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHMP1BQ7LBR1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 AC087499.5-201ENST00000452760 1342 ntBASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHMP1BQ7LBR1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms