Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1AQ71U36 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC007686.3-201ENST00000619017 3487 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 BEND3P1-201ENST00000421591 1944 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC087386.2-201ENST00000623212 4637 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC079140.1-201ENST00000508039 487 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AL138918.1-201ENST00000568306 659 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC022145.2-201ENST00000598203 171 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC105339.1-204ENST00000636249 355 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC107918.4-201ENST00000641966 3141 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC148477.4-201ENST00000613430 1793 ntBASIC14.47□□□□□ -0.09
TUBA1AQ71U36 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TUBA1AQ71U36 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AJ011931.1-201ENST00000618749 2492 ntBASIC14.46□□□□□ -0.09
TUBA1AQ71U36 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AC004461.1-201ENST00000412461 403 ntBASIC14.46□□□□□ -0.09
TUBA1AQ71U36 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 CNN2P11-201ENST00000429351 262 ntBASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 KRT18P34-201ENST00000488218 1270 ntBASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms