Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AP002803.1-201ENST00000528836 498 ntBASIC12.67□□□□□ -0.38
VPS13CQ709C8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AL358472.3-201ENST00000608147 415 ntBASIC12.67□□□□□ -0.38
VPS13CQ709C8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13CQ709C8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13CQ709C8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13CQ709C8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13CQ709C8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13CQ709C8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AC055811.4-201ENST00000624039 1754 ntBASIC12.67□□□□□ -0.38
VPS13CQ709C8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AL008707.1-201ENST00000422498 534 ntBASIC12.67□□□□□ -0.38
VPS13CQ709C8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13CQ709C8 AC009779.1-201ENST00000551138 283 ntBASIC12.67□□□□□ -0.38
VPS13CQ709C8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VPS13CQ709C8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.67□□□□□ -0.38
VPS13CQ709C8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 AC026410.1-201ENST00000507366 1101 ntBASIC12.66□□□□□ -0.38
VPS13CQ709C8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 DUX4L47-201ENST00000566374 394 ntBASIC12.66□□□□□ -0.38
VPS13CQ709C8 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.66□□□□□ -0.38
VPS13CQ709C8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 AC078991.1-201ENST00000437297 610 ntBASIC12.66□□□□□ -0.38
VPS13CQ709C8 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 Z98259.2-201ENST00000641583 609 ntBASIC12.66□□□□□ -0.38
VPS13CQ709C8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.66□□□□□ -0.38
VPS13CQ709C8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 RCC2P8-201ENST00000502779 1035 ntBASIC12.66□□□□□ -0.38
VPS13CQ709C8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.66□□□□□ -0.38
VPS13CQ709C8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VPS13CQ709C8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 AC010141.1-201ENST00000411585 623 ntBASIC12.65□□□□□ -0.38
VPS13CQ709C8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 RPL18P13-201ENST00000478088 569 ntBASIC12.65□□□□□ -0.38
VPS13CQ709C8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 EIF5AP2-201ENST00000585668 1047 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms