Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 AL157813.1-201ENST00000612996 587 ntBASIC14.85□□□□□ -0.03
RIF1Q5UIP0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 Z69890.1-201ENST00000382990 339 ntBASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 PUDPP3-201ENST00000445368 636 ntBASIC14.85□□□□□ -0.03
RIF1Q5UIP0 AC053503.3-201ENST00000448375 114 ntBASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CHCHD2P2-201ENST00000503744 321 ntBASIC14.85□□□□□ -0.03
RIF1Q5UIP0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 MIR6769A-201ENST00000617340 73 ntBASIC14.85□□□□□ -0.03
RIF1Q5UIP0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RIF1Q5UIP0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.84□□□□□ -0.03
RIF1Q5UIP0 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AL354861.1-201ENST00000445213 355 ntBASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 LINC00634-202ENST00000505157 222 ntBASIC14.84□□□□□ -0.03
RIF1Q5UIP0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AC009093.2-202ENST00000620513 2079 ntBASIC14.84□□□□□ -0.03
RIF1Q5UIP0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AC005052.1-201ENST00000625181 2492 ntBASIC14.84□□□□□ -0.03
RIF1Q5UIP0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AC239868.1-201ENST00000369385 493 ntBASIC14.84□□□□□ -0.03
RIF1Q5UIP0 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIF1Q5UIP0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RIF1Q5UIP0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.83□□□□□ -0.03
RIF1Q5UIP0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIF1Q5UIP0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIF1Q5UIP0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.83□□□□□ -0.03
RIF1Q5UIP0 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIF1Q5UIP0 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RIF1Q5UIP0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 AC008723.1-201ENST00000506922 207 ntBASIC14.83□□□□□ -0.04
RIF1Q5UIP0 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
RIF1Q5UIP0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms