Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LRRK2Q5S007 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRK2Q5S007 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 OR2K2-202ENST00000374428 1038 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 MRPL22P1-201ENST00000505398 616 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 MBLAC2-202ENST00000514906 1936 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A7P-201ENST00000382628 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A23P-201ENST00000400136 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A21P-201ENST00000510875 1396 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A15P-201ENST00000514465 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A6P-201ENST00000515148 1394 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A16P-201ENST00000526662 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A9P-201ENST00000527940 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A5P-201ENST00000528738 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A14P-201ENST00000530386 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 FAM90A13P-201ENST00000534703 1395 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 HIST2H2BA-201ENST00000412169 381 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 AC093752.3-201ENST00000567343 901 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 AL139339.2-201ENST00000608063 657 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRK2Q5S007 MRPL37P1-201ENST00000592451 1337 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRK2Q5S007 BCL2-203ENST00000589955 5011 ntBASIC13.24□□□□□ -0.29
LRRK2Q5S007 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AP005212.2-201ENST00000584979 510 ntBASIC13.23□□□□□ -0.29
LRRK2Q5S007 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AC011477.6-201ENST00000604980 1927 ntBASIC13.23□□□□□ -0.29
LRRK2Q5S007 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRK2Q5S007 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC13.23□□□□□ -0.29
LRRK2Q5S007 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms