Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 C18orf15-201ENST00000623680 2534 ntBASIC13.61□□□□□ -0.23
FREM1Q5H8C1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 RN7SL752P-201ENST00000463779 287 ntBASIC13.61□□□□□ -0.23
FREM1Q5H8C1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
FREM1Q5H8C1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 REXO1L2P-201ENST00000425429 2069 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 C1QBPP1-201ENST00000400117 770 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 BAATP1-201ENST00000412284 1225 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 AL355864.2-201ENST00000447420 863 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 SLC25A47P1-201ENST00000531577 414 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 AL022328.1-201ENST00000610050 478 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 AL162727.3-201ENST00000635661 2787 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 REXO1L4P-201ENST00000605109 1937 ntBASIC13.6□□□□□ -0.23
FREM1Q5H8C1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM1Q5H8C1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM1Q5H8C1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM1Q5H8C1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM1Q5H8C1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM1Q5H8C1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM1Q5H8C1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
FREM1Q5H8C1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM1Q5H8C1 GPR53P-205ENST00000457298 1084 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms