Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 BX284668.4-201ENST00000453917 508 ntBASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AC105129.2-201ENST00000559536 390 ntBASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 AC010491.1-201ENST00000563101 2797 ntBASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTC1Q2NKJ3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AL596087.1-201ENST00000400979 1969 ntBASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 BTBD6P1-201ENST00000412176 1267 ntBASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AC091804.1-201ENST00000486888 567 ntBASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 SCARNA20.5-201ENST00000516991 142 ntBASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AC000095.1-201ENST00000603208 874 ntBASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 MIR6727-201ENST00000620702 65 ntBASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTC1Q2NKJ3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 AC099063.4-201ENST00000641099 1602 ntBASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 AC245100.5-201ENST00000452108 331 ntBASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 SLED1-202ENST00000512051 380 ntBASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms