Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.87□□□□□ -0.19
ODF4Q2M2E3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 INTS4P1-203ENST00000641008 3683 ntBASIC13.86□□□□□ -0.19
ODF4Q2M2E3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 MIR940-201ENST00000401276 94 ntBASIC13.86□□□□□ -0.19
ODF4Q2M2E3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.86□□□□□ -0.19
ODF4Q2M2E3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 AKAP8P1-201ENST00000434743 1349 ntBASIC13.86□□□□□ -0.19
ODF4Q2M2E3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ODF4Q2M2E3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 CYP4F24P-201ENST00000586049 1580 ntBASIC13.85□□□□□ -0.19
ODF4Q2M2E3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 AC142381.1-201ENST00000426099 345 ntBASIC13.85□□□□□ -0.19
ODF4Q2M2E3 RPS8P6-201ENST00000426177 609 ntBASIC13.85□□□□□ -0.19
ODF4Q2M2E3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 SPDYE11-202ENST00000450699 704 ntBASIC13.85□□□□□ -0.19
ODF4Q2M2E3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 SPDYE9P-201ENST00000570642 692 ntBASIC13.85□□□□□ -0.19
ODF4Q2M2E3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.85□□□□□ -0.19
ODF4Q2M2E3 AC027601.4-201ENST00000611259 610 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms