Protein–RNA interactions for Protein: P62273

RPS29, 40S ribosomal protein S29, humanhuman

Known RBP Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P62273 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 CICP6-201ENST00000457191 2729 ntBASIC8.8□□□□□ -1
RPS29P62273 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC8.8□□□□□ -1
RPS29P62273 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 ZBED1P1-201ENST00000502364 1930 ntBASIC8.8□□□□□ -1
RPS29P62273 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
RPS29P62273 REXO1L4P-201ENST00000605109 1937 ntBASIC8.8□□□□□ -1
RPS29P62273 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC8.8□□□□□ -1
RPS29P62273 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
RPS29P62273 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC8.8□□□□□ -1
RPS29P62273 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RPS29P62273 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
RPS29P62273 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 AC092384.3-202ENST00000564646 2873 ntBASIC8.79□□□□□ -1
RPS29P62273 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 AC023024.2-201ENST00000623561 1993 ntBASIC8.79□□□□□ -1
RPS29P62273 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 AC079328.2-201ENST00000561241 3354 ntBASIC8.79□□□□□ -1
RPS29P62273 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC8.79□□□□□ -1
RPS29P62273 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
RPS29P62273 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 ELK1P1-201ENST00000485699 580 ntBASIC8.79□□□□□ -1
RPS29P62273 GIMAP3P-201ENST00000495150 836 ntBASIC8.79□□□□□ -1
RPS29P62273 AC022137.2-201ENST00000503482 481 ntBASIC8.79□□□□□ -1
RPS29P62273 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC8.79□□□□□ -1
RPS29P62273 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC8.79□□□□□ -1
RPS29P62273 IFT20-206ENST00000578122 834 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 IFT20-208ENST00000578985 831 ntTSL 3 BASIC8.79□□□□□ -1
RPS29P62273 PIGL-212ENST00000581006 554 ntTSL 4 BASIC8.79□□□□□ -1
RPS29P62273 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC8.79□□□□□ -1
RPS29P62273 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC8.79□□□□□ -1
RPS29P62273 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RPS29P62273 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC8.79□□□□□ -1
RPS29P62273 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RPS29P62273 AL162727.3-201ENST00000635661 2787 ntBASIC8.79□□□□□ -1
RPS29P62273 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RPS29P62273 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC8.79□□□□□ -1
RPS29P62273 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 PPT1-215ENST00000641471 2368 ntBASIC8.79□□□□□ -1
RPS29P62273 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 AC009090.5-201ENST00000624886 2285 ntBASIC8.79□□□□□ -1
RPS29P62273 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC8.79□□□□□ -1
RPS29P62273 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RPS29P62273 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms