Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SEC61A1P61619 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.74□□□□□ -0.21
SEC61A1P61619 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SEC61A1P61619 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SEC61A1P61619 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.73□□□□□ -0.21
SEC61A1P61619 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.73□□□□□ -0.21
SEC61A1P61619 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.73□□□□□ -0.21
SEC61A1P61619 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.73□□□□□ -0.21
SEC61A1P61619 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.73□□□□□ -0.21
SEC61A1P61619 SPDYE14P-201ENST00000442619 822 ntBASIC13.73□□□□□ -0.21
SEC61A1P61619 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.73□□□□□ -0.21
SEC61A1P61619 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.73□□□□□ -0.21
SEC61A1P61619 AC026150.2-201ENST00000564693 1156 ntBASIC13.73□□□□□ -0.21
SEC61A1P61619 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SEC61A1P61619 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.73□□□□□ -0.21
SEC61A1P61619 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.73□□□□□ -0.21
SEC61A1P61619 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.73□□□□□ -0.21
SEC61A1P61619 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.73□□□□□ -0.21
SEC61A1P61619 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.73□□□□□ -0.21
SEC61A1P61619 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SEC61A1P61619 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SEC61A1P61619 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SEC61A1P61619 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.73□□□□□ -0.21
SEC61A1P61619 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SEC61A1P61619 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.72□□□□□ -0.21
SEC61A1P61619 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SEC61A1P61619 AC015656.1-201ENST00000624209 3578 ntBASIC13.72□□□□□ -0.21
SEC61A1P61619 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 MIR346-201ENST00000362234 95 ntBASIC13.72□□□□□ -0.21
SEC61A1P61619 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.72□□□□□ -0.21
SEC61A1P61619 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SEC61A1P61619 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms