Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP4BP1P59074 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP4BP1P59074 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 FO393414.2-201ENST00000405153 598 ntBASIC17.85■□□□□ 0.45
CHMP4BP1P59074 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 AP005117.1-202ENST00000581724 1908 ntBASIC17.85■□□□□ 0.45
CHMP4BP1P59074 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 AL512343.1-201ENST00000605837 169 ntBASIC17.85■□□□□ 0.45
CHMP4BP1P59074 AC099568.2-201ENST00000609194 695 ntBASIC17.85■□□□□ 0.45
CHMP4BP1P59074 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP4BP1P59074 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AZGP1P1-201ENST00000411909 902 ntBASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AC007389.4-201ENST00000454674 793 ntBASIC17.84■□□□□ 0.45
CHMP4BP1P59074 CROCCP4-201ENST00000457096 498 ntBASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.84■□□□□ 0.45
CHMP4BP1P59074 MIR6799-201ENST00000620297 69 ntBASIC17.84■□□□□ 0.45
CHMP4BP1P59074 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP4BP1P59074 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms