Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GFRA1P56159 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GFRA1P56159 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GFRA1P56159 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GFRA1P56159 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GFRA1P56159 AC134312.5-201ENST00000568031 1313 ntBASIC13.89□□□□□ -0.19
GFRA1P56159 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.89□□□□□ -0.19
GFRA1P56159 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.89□□□□□ -0.19
GFRA1P56159 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
GFRA1P56159 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.88□□□□□ -0.19
GFRA1P56159 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 KRT43P-201ENST00000434019 910 ntBASIC13.88□□□□□ -0.19
GFRA1P56159 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.88□□□□□ -0.19
GFRA1P56159 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.88□□□□□ -0.19
GFRA1P56159 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.88□□□□□ -0.19
GFRA1P56159 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.88□□□□□ -0.19
GFRA1P56159 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GFRA1P56159 AC007787.1-201ENST00000588095 1583 ntBASIC13.88□□□□□ -0.19
GFRA1P56159 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GFRA1P56159 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.87□□□□□ -0.19
GFRA1P56159 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
GFRA1P56159 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.87□□□□□ -0.19
GFRA1P56159 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.87□□□□□ -0.19
GFRA1P56159 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.87□□□□□ -0.19
GFRA1P56159 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.87□□□□□ -0.19
GFRA1P56159 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.87□□□□□ -0.19
GFRA1P56159 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.87□□□□□ -0.19
GFRA1P56159 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
GFRA1P56159 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
GFRA1P56159 AL645937.2-201ENST00000396808 931 ntBASIC13.87□□□□□ -0.19
GFRA1P56159 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 AC104457.1-201ENST00000401024 814 ntBASIC13.87□□□□□ -0.19
GFRA1P56159 NUS1P3-201ENST00000423502 862 ntBASIC13.87□□□□□ -0.19
GFRA1P56159 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.87□□□□□ -0.19
GFRA1P56159 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 AL355864.2-201ENST00000447420 863 ntBASIC13.87□□□□□ -0.19
GFRA1P56159 AC004066.1-201ENST00000502488 802 ntBASIC13.87□□□□□ -0.19
GFRA1P56159 IGHV3-71-201ENST00000523324 359 ntBASIC13.87□□□□□ -0.19
GFRA1P56159 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.87□□□□□ -0.19
GFRA1P56159 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.87□□□□□ -0.19
GFRA1P56159 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms