Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
FOXA3P55318 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
FOXA3P55318 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.78□□□□□ -0.52
FOXA3P55318 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.77□□□□□ -0.52
FOXA3P55318 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
FOXA3P55318 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.77□□□□□ -0.52
FOXA3P55318 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
FOXA3P55318 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
FOXA3P55318 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.77□□□□□ -0.52
FOXA3P55318 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.77□□□□□ -0.52
FOXA3P55318 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.77□□□□□ -0.52
FOXA3P55318 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.77□□□□□ -0.52
FOXA3P55318 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
FOXA3P55318 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 AC136759.1-202ENST00000530858 2194 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
FOXA3P55318 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.77□□□□□ -0.53
FOXA3P55318 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 KRT16P4-201ENST00000453883 522 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.77□□□□□ -0.53
FOXA3P55318 DUX4L26-201ENST00000489078 1255 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 AC104819.1-201ENST00000504587 486 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 AC093827.2-201ENST00000512654 315 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
FOXA3P55318 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.77□□□□□ -0.53
FOXA3P55318 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 AL731571.1-201ENST00000617058 5428 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 CICP17-201ENST00000418553 2377 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
FOXA3P55318 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
FOXA3P55318 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.77□□□□□ -0.53
FOXA3P55318 CICP8-201ENST00000455800 2813 ntBASIC11.77□□□□□ -0.53
FOXA3P55318 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
FOXA3P55318 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
FOXA3P55318 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.76□□□□□ -0.53
FOXA3P55318 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 AL589702.1-201ENST00000641229 1509 ntBASIC11.76□□□□□ -0.53
FOXA3P55318 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
FOXA3P55318 HSPA7-201ENST00000445535 1927 ntBASIC11.76□□□□□ -0.53
FOXA3P55318 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.76□□□□□ -0.53
FOXA3P55318 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
FOXA3P55318 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.76□□□□□ -0.53
FOXA3P55318 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.76□□□□□ -0.53
FOXA3P55318 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.76□□□□□ -0.53
FOXA3P55318 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
FOXA3P55318 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
FOXA3P55318 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.76□□□□□ -0.53
FOXA3P55318 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.76□□□□□ -0.53
FOXA3P55318 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.76□□□□□ -0.53
FOXA3P55318 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
FOXA3P55318 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms