Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ALG1L5P-201ENST00000482043 771 ntBASIC14.58□□□□□ -0.08
CDH12P55289 AC069335.1-201ENST00000489972 472 ntBASIC14.58□□□□□ -0.08
CDH12P55289 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.58□□□□□ -0.08
CDH12P55289 SLC25A39P2-201ENST00000537614 270 ntBASIC14.58□□□□□ -0.08
CDH12P55289 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH12P55289 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH12P55289 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH12P55289 MROH4P-201ENST00000431302 1578 ntBASIC14.58□□□□□ -0.08
CDH12P55289 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
CDH12P55289 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
CDH12P55289 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
CDH12P55289 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 CYP4F24P-201ENST00000586049 1580 ntBASIC14.57□□□□□ -0.08
CDH12P55289 AP3S2-216ENST00000617003 1561 ntBASIC14.57□□□□□ -0.08
CDH12P55289 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 AL139010.1-201ENST00000454878 894 ntBASIC14.57□□□□□ -0.08
CDH12P55289 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.57□□□□□ -0.08
CDH12P55289 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 AL671883.3-201ENST00000603274 991 ntBASIC14.57□□□□□ -0.08
CDH12P55289 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 AC084121.4-201ENST00000641598 221 ntBASIC14.57□□□□□ -0.08
CDH12P55289 AF228730.8-201ENST00000642140 221 ntBASIC14.57□□□□□ -0.08
CDH12P55289 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH12P55289 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH12P55289 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDH12P55289 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH12P55289 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms