Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR4P51571 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR4P51571 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSR4P51571 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSR4P51571 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR4P51571 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 RPL5P21-201ENST00000404620 815 ntBASIC14.24□□□□□ -0.13
SSR4P51571 BAATP1-201ENST00000412284 1225 ntBASIC14.24□□□□□ -0.13
SSR4P51571 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.24□□□□□ -0.13
SSR4P51571 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.24□□□□□ -0.13
SSR4P51571 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.24□□□□□ -0.13
SSR4P51571 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR4P51571 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR4P51571 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 AL359881.2-201ENST00000602973 570 ntBASIC14.24□□□□□ -0.13
SSR4P51571 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 BX539320.1-201ENST00000623759 877 ntBASIC14.24□□□□□ -0.13
SSR4P51571 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 NORAD-201ENST00000565493 5339 ntBASIC14.24□□□□□ -0.13
SSR4P51571 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.24□□□□□ -0.13
SSR4P51571 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SSR4P51571 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSR4P51571 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 AC134312.5-201ENST00000568031 1313 ntBASIC14.23□□□□□ -0.13
SSR4P51571 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 ACKR1-201ENST00000368121 1240 ntBASIC14.23□□□□□ -0.13
SSR4P51571 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR4P51571 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 AC079776.1-201ENST00000401540 1152 ntBASIC14.23□□□□□ -0.13
SSR4P51571 BOLA2P3-201ENST00000404566 256 ntBASIC14.23□□□□□ -0.13
SSR4P51571 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR4P51571 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 AC093433.1-201ENST00000458048 571 ntBASIC14.23□□□□□ -0.13
SSR4P51571 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SSR4P51571 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.23□□□□□ -0.13
SSR4P51571 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR4P51571 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR4P51571 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.23□□□□□ -0.13
SSR4P51571 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR4P51571 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR4P51571 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR4P51571 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms