Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.99□□□□□ -0.01
SLC6A12P48065 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SLC6A12P48065 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC6A12P48065 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SLC6A12P48065 REXO1L4P-201ENST00000605109 1937 ntBASIC14.99□□□□□ -0.01
SLC6A12P48065 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC6A12P48065 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A12P48065 TSPY26P-202ENST00000565928 3884 ntBASIC14.99□□□□□ -0.01
SLC6A12P48065 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SLC6A12P48065 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A12P48065 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A12P48065 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A12P48065 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A12P48065 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SLC6A12P48065 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SLC6A12P48065 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SLC6A12P48065 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC6A12P48065 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SLC6A12P48065 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SLC6A12P48065 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC6A12P48065 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A12P48065 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.98□□□□□ -0.01
SLC6A12P48065 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A12P48065 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC6A12P48065 RARRES2P5-201ENST00000564013 466 ntBASIC14.98□□□□□ -0.01
SLC6A12P48065 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A12P48065 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A12P48065 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC6A12P48065 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SLC6A12P48065 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A12P48065 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A12P48065 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SLC6A12P48065 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 AC023824.1-201ENST00000562945 2975 ntBASIC14.97□□□□□ -0.01
SLC6A12P48065 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.97□□□□□ -0.01
SLC6A12P48065 AC012508.2-201ENST00000567613 1472 ntBASIC14.97□□□□□ -0.01
SLC6A12P48065 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLC6A12P48065 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC6A12P48065 DOC2GP-202ENST00000514950 1163 ntBASIC14.97□□□□□ -0.01
SLC6A12P48065 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC6A12P48065 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC6A12P48065 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms