Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.32■□□□□ 0.2
SLC1A1P43005 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC1A1P43005 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC1A1P43005 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC1A1P43005 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 AJ011931.1-201ENST00000618749 2492 ntBASIC16.31■□□□□ 0.2
SLC1A1P43005 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 PCDHA3-202ENST00000532566 4594 ntBASIC16.31■□□□□ 0.2
SLC1A1P43005 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.31■□□□□ 0.2
SLC1A1P43005 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 RPL13P2-201ENST00000440687 659 ntBASIC16.31■□□□□ 0.2
SLC1A1P43005 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SLC1A1P43005 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC1A1P43005 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SLC1A1P43005 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC1A1P43005 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SLC1A1P43005 AL390755.1-201ENST00000623716 2027 ntBASIC16.31■□□□□ 0.2
SLC1A1P43005 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.31■□□□□ 0.2
SLC1A1P43005 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A1P43005 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
SLC1A1P43005 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
SLC1A1P43005 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC1A1P43005 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC1A1P43005 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC1A1P43005 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 TOMM22P5-201ENST00000416399 439 ntBASIC16.3■□□□□ 0.2
SLC1A1P43005 HLA-J-203ENST00000494367 1087 ntBASIC16.3■□□□□ 0.2
SLC1A1P43005 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC1A1P43005 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC1A1P43005 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC1A1P43005 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC1A1P43005 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC1A1P43005 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC1A1P43005 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC1A1P43005 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC1A1P43005 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC1A1P43005 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 AL136379.1-201ENST00000623471 2642 ntBASIC16.3■□□□□ 0.2
SLC1A1P43005 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A1P43005 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A1P43005 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A1P43005 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A1P43005 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms