Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.76□□□□□ -0.37
CEACAM3P40198 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.76□□□□□ -0.37
CEACAM3P40198 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.76□□□□□ -0.37
CEACAM3P40198 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.76□□□□□ -0.37
CEACAM3P40198 AL096865.1-201ENST00000606796 927 ntBASIC12.76□□□□□ -0.37
CEACAM3P40198 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CEACAM3P40198 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 AL133267.1-201ENST00000398220 340 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.75□□□□□ -0.37
CEACAM3P40198 FAM8A3P-201ENST00000427218 844 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 RPL13P2-201ENST00000440687 659 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 FAM207CP-201ENST00000443486 507 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.75□□□□□ -0.37
CEACAM3P40198 KRT18P43-201ENST00000469825 1281 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 MEIS3P1-201ENST00000495167 958 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.75□□□□□ -0.37
CEACAM3P40198 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 AC138969.3-201ENST00000546612 1459 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 AC138932.2-201ENST00000548268 1459 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 AC126755.4-201ENST00000549796 1459 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
CEACAM3P40198 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CEACAM3P40198 AC092337.1-201ENST00000568699 1129 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 AC009407.1-201ENST00000568958 598 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.75□□□□□ -0.37
CEACAM3P40198 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.75□□□□□ -0.37
CEACAM3P40198 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CEACAM3P40198 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.75□□□□□ -0.37
CEACAM3P40198 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.75□□□□□ -0.37
CEACAM3P40198 AC004461.2-201ENST00000629517 803 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 LINC02228-204ENST00000642115 2962 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.75□□□□□ -0.37
CEACAM3P40198 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CEACAM3P40198 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CEACAM3P40198 SBF1P1-201ENST00000444527 5631 ntBASIC12.75□□□□□ -0.37
CEACAM3P40198 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.75□□□□□ -0.37
CEACAM3P40198 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CEACAM3P40198 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CEACAM3P40198 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CEACAM3P40198 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms