Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT20P35900 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT20P35900 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT20P35900 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT20P35900 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT20P35900 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT20P35900 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT20P35900 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT20P35900 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
KRT20P35900 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
KRT20P35900 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.89□□□□□ -0.03
KRT20P35900 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
KRT20P35900 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.89□□□□□ -0.03
KRT20P35900 MTND6P24-201ENST00000440466 518 ntBASIC14.89□□□□□ -0.03
KRT20P35900 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 AC069262.1-201ENST00000539058 672 ntBASIC14.89□□□□□ -0.03
KRT20P35900 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.89□□□□□ -0.03
KRT20P35900 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.89□□□□□ -0.03
KRT20P35900 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.89□□□□□ -0.03
KRT20P35900 AC007967.4-201ENST00000614700 386 ntBASIC14.89□□□□□ -0.03
KRT20P35900 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.89□□□□□ -0.03
KRT20P35900 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
KRT20P35900 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
KRT20P35900 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.89□□□□□ -0.03
KRT20P35900 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
KRT20P35900 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
KRT20P35900 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.89□□□□□ -0.03
KRT20P35900 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.88□□□□□ -0.03
KRT20P35900 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
KRT20P35900 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT20P35900 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.88□□□□□ -0.03
KRT20P35900 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
KRT20P35900 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT20P35900 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
KRT20P35900 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
KRT20P35900 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
KRT20P35900 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT20P35900 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT20P35900 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.88□□□□□ -0.03
KRT20P35900 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT20P35900 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT20P35900 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.88□□□□□ -0.03
KRT20P35900 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.88□□□□□ -0.03
KRT20P35900 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.88□□□□□ -0.03
KRT20P35900 AC109322.1-201ENST00000524499 1264 ntBASIC14.88□□□□□ -0.03
KRT20P35900 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT20P35900 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
KRT20P35900 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.88□□□□□ -0.03
KRT20P35900 AC105021.1-202ENST00000570572 669 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms