Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CHKAP35790 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.46■□□□□ 0.23
CHKAP35790 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.46■□□□□ 0.23
CHKAP35790 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CHKAP35790 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 C18orf15-201ENST00000623680 2534 ntBASIC16.46■□□□□ 0.23
CHKAP35790 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.46■□□□□ 0.23
CHKAP35790 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.46■□□□□ 0.23
CHKAP35790 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.46■□□□□ 0.23
CHKAP35790 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.46■□□□□ 0.23
CHKAP35790 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.46■□□□□ 0.23
CHKAP35790 SPDYE18-201ENST00000510091 1050 ntBASIC16.46■□□□□ 0.23
CHKAP35790 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.46■□□□□ 0.23
CHKAP35790 AP005018.1-201ENST00000525475 301 ntBASIC16.46■□□□□ 0.23
CHKAP35790 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.46■□□□□ 0.23
CHKAP35790 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.46■□□□□ 0.23
CHKAP35790 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.46■□□□□ 0.23
CHKAP35790 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.46■□□□□ 0.23
CHKAP35790 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
CHKAP35790 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHKAP35790 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHKAP35790 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.22
CHKAP35790 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CHKAP35790 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHKAP35790 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CHKAP35790 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.46■□□□□ 0.22
CHKAP35790 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.22
CHKAP35790 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHKAP35790 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.45■□□□□ 0.22
CHKAP35790 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 AZGP1P1-201ENST00000411909 902 ntBASIC16.45■□□□□ 0.22
CHKAP35790 AC005034.1-201ENST00000426657 489 ntBASIC16.45■□□□□ 0.22
CHKAP35790 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 AC055876.2-201ENST00000531834 546 ntBASIC16.45■□□□□ 0.22
CHKAP35790 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.45■□□□□ 0.22
CHKAP35790 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CHKAP35790 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.45■□□□□ 0.22
CHKAP35790 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.45■□□□□ 0.22
CHKAP35790 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.45■□□□□ 0.22
CHKAP35790 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 SLC7A15P-201ENST00000424028 1363 ntBASIC16.45■□□□□ 0.22
CHKAP35790 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CHKAP35790 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHKAP35790 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHKAP35790 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.45■□□□□ 0.22
CHKAP35790 AC018892.3-201ENST00000623986 2499 ntBASIC16.44■□□□□ 0.22
CHKAP35790 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.44■□□□□ 0.22
CHKAP35790 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHKAP35790 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHKAP35790 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHKAP35790 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.44■□□□□ 0.22
CHKAP35790 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHKAP35790 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHKAP35790 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHKAP35790 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHKAP35790 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHKAP35790 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHKAP35790 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHKAP35790 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms