Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COPB2P35606 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.73■□□□□ 0.43
COPB2P35606 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 FAM86HP-204ENST00000513466 959 ntBASIC17.73■□□□□ 0.43
COPB2P35606 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 AC078819.1-201ENST00000547454 765 ntBASIC17.73■□□□□ 0.43
COPB2P35606 AC012085.1-201ENST00000548270 765 ntBASIC17.73■□□□□ 0.43
COPB2P35606 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COPB2P35606 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.73■□□□□ 0.43
COPB2P35606 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.73■□□□□ 0.43
COPB2P35606 RN7SL48P-201ENST00000579283 293 ntBASIC17.73■□□□□ 0.43
COPB2P35606 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.73■□□□□ 0.43
COPB2P35606 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.73■□□□□ 0.43
COPB2P35606 AC025181.2-201ENST00000606994 802 ntBASIC17.73■□□□□ 0.43
COPB2P35606 AC091271.1-201ENST00000611877 1162 ntBASIC17.73■□□□□ 0.43
COPB2P35606 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.73■□□□□ 0.43
COPB2P35606 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COPB2P35606 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
COPB2P35606 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.73■□□□□ 0.43
COPB2P35606 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPB2P35606 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
COPB2P35606 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 Z93015.1-201ENST00000451718 390 ntBASIC17.72■□□□□ 0.43
COPB2P35606 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.72■□□□□ 0.43
COPB2P35606 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.72■□□□□ 0.43
COPB2P35606 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.72■□□□□ 0.43
COPB2P35606 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 AC244093.1-201ENST00000610837 814 ntBASIC17.72■□□□□ 0.43
COPB2P35606 GPR182-203ENST00000622922 591 ntBASIC17.72■□□□□ 0.43
COPB2P35606 AC006453.4-201ENST00000636949 1252 ntBASIC17.72■□□□□ 0.43
COPB2P35606 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
COPB2P35606 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
COPB2P35606 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.72■□□□□ 0.43
COPB2P35606 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COPB2P35606 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.72■□□□□ 0.43
COPB2P35606 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.71■□□□□ 0.43
COPB2P35606 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.71■□□□□ 0.43
COPB2P35606 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COPB2P35606 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COPB2P35606 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
COPB2P35606 KLF2P2-201ENST00000416807 1039 ntBASIC17.71■□□□□ 0.43
COPB2P35606 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.71■□□□□ 0.43
COPB2P35606 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPB2P35606 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms