Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC008738.7-201ENST00000609744 511 ntBASIC14.33□□□□□ -0.12
SHC1P29353 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.33□□□□□ -0.12
SHC1P29353 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.33□□□□□ -0.12
SHC1P29353 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.33□□□□□ -0.12
SHC1P29353 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SHC1P29353 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.33□□□□□ -0.12
SHC1P29353 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.33□□□□□ -0.12
SHC1P29353 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.33□□□□□ -0.12
SHC1P29353 AC087481.3-201ENST00000602886 1894 ntBASIC14.33□□□□□ -0.12
SHC1P29353 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SHC1P29353 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
SHC1P29353 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.33□□□□□ -0.12
SHC1P29353 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SHC1P29353 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.33□□□□□ -0.12
SHC1P29353 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SHC1P29353 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.32□□□□□ -0.12
SHC1P29353 BCRP1-201ENST00000444246 691 ntBASIC14.32□□□□□ -0.12
SHC1P29353 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.32□□□□□ -0.12
SHC1P29353 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.32□□□□□ -0.12
SHC1P29353 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.32□□□□□ -0.12
SHC1P29353 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SHC1P29353 MIR4313-201ENST00000580760 101 ntBASIC14.32□□□□□ -0.12
SHC1P29353 AC025048.3-201ENST00000590609 569 ntBASIC14.32□□□□□ -0.12
SHC1P29353 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 AC097359.3-201ENST00000603982 1210 ntBASIC14.32□□□□□ -0.12
SHC1P29353 AC005702.4-201ENST00000618393 416 ntBASIC14.32□□□□□ -0.12
SHC1P29353 MIR6069-201ENST00000620069 79 ntBASIC14.32□□□□□ -0.12
SHC1P29353 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.32□□□□□ -0.12
SHC1P29353 AL109936.8-201ENST00000641772 604 ntBASIC14.32□□□□□ -0.12
SHC1P29353 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 AL161772.1-201ENST00000610494 4412 ntBASIC14.32□□□□□ -0.12
SHC1P29353 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.32□□□□□ -0.12
SHC1P29353 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.32□□□□□ -0.12
SHC1P29353 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHC1P29353 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 AC023908.3-201ENST00000564211 3047 ntBASIC14.31□□□□□ -0.12
SHC1P29353 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHC1P29353 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.31□□□□□ -0.12
SHC1P29353 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SHC1P29353 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms