Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN3P26045 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN3P26045 AC005498.2-205ENST00000593218 784 ntBASIC15.88■□□□□ 0.13
PTPN3P26045 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PTPN3P26045 AC004840.1-201ENST00000636359 365 ntBASIC15.88■□□□□ 0.13
PTPN3P26045 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN3P26045 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN3P26045 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN3P26045 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.88■□□□□ 0.13
PTPN3P26045 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PTPN3P26045 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN3P26045 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN3P26045 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 AGAP7P-201ENST00000582299 2062 ntBASIC15.87■□□□□ 0.13
PTPN3P26045 AGAP14-201ENST00000624701 2060 ntBASIC15.87■□□□□ 0.13
PTPN3P26045 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.87■□□□□ 0.13
PTPN3P26045 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.87■□□□□ 0.13
PTPN3P26045 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.87■□□□□ 0.13
PTPN3P26045 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.87■□□□□ 0.13
PTPN3P26045 AL589987.1-201ENST00000453380 819 ntBASIC15.87■□□□□ 0.13
PTPN3P26045 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 TIMM17BP1-201ENST00000545713 516 ntBASIC15.87■□□□□ 0.13
PTPN3P26045 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
PTPN3P26045 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
PTPN3P26045 AC025181.2-201ENST00000606994 802 ntBASIC15.87■□□□□ 0.13
PTPN3P26045 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.87■□□□□ 0.13
PTPN3P26045 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.87■□□□□ 0.13
PTPN3P26045 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PTPN3P26045 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PTPN3P26045 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PTPN3P26045 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PTPN3P26045 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.87■□□□□ 0.13
PTPN3P26045 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN3P26045 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN3P26045 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PTPN3P26045 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTPN3P26045 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN3P26045 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PTPN3P26045 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
PTPN3P26045 FAM8A3P-201ENST00000427218 844 ntBASIC15.86■□□□□ 0.13
PTPN3P26045 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.86■□□□□ 0.13
PTPN3P26045 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
PTPN3P26045 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN3P26045 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 AC135586.1-201ENST00000539323 574 ntBASIC15.86■□□□□ 0.13
PTPN3P26045 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN3P26045 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms